LOCUS BG081698 627 bp mRNA linear EST 12-MAY-2010 DEFINITION H3068B02-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3068B02 5', mRNA sequence. ACCESSION BG081698 VERSION BG081698.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 627) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081698.1. Other_ESTs: H3068B02-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3068 row: B column: 02 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..627 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3068B02-5" /db_xref="taxon:10090" /clone="H3068B02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 134 a 161 c 149 g 183 t ORIGIN 1 attgacttgg aaaccatgtg tcgggcgggt ctgcggtgtt gtgttttgct ggcattgccg 61 tcgatgctgg gtgtgtgaaa atactgagag gcagctctga gatttgacaa cggaggaaat 121 gataccagca gctccttctc ccctcaggcc gctttgactc ttccgcgaag acctttcctt 181 cactgctcca ctgtgatacc catcgcggtc ctgagtgtga agctcgccgt gcacttgttc 241 aagctcaggg actcgtggcg ttttctcccg tggatgatac tcgtttcctg gacctcacac 301 cacatccgcg atggaatccg tcacggcctg tggatatgcc cgtttggaaa aactcctcct 361 ttgccctcct cgttttatgt aataagcaca ttgtccctgc cacacctgtg ctcattcctg 421 atgtatttaa cagggaccag acaaacggtg tcttccaaat acggaatgcg cattgatgtc 481 tgagatgacc ttatatgtgg ctctaagaga aggaattcgc tcagatgatc caatattcaa 541 gtgaaattta taaaacatag gcactttatt tagtttttac agttcctgtg ccctcttgtc 601 tgcgagcatg ctcagtactt gcgtgcc //