LOCUS BG081523 607 bp mRNA linear EST 12-MAY-2010 DEFINITION H3066B09-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3066B09 5', mRNA sequence. ACCESSION BG081523 VERSION BG081523.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 607) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081523.1. Other_ESTs: H3066B09-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3066 row: B column: 09 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..607 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3066B09-5" /db_xref="taxon:10090" /clone="H3066B09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 220 a 134 c 132 g 121 t ORIGIN 1 ggagaacaaa cctaaggaga attcagaaca accagagggt gaagatgaag agaatgatga 61 agatgtggag caagaaattc ccatagagcc tccgagtgca accaccacta ctacaattgg 121 aatctctgct acatctacca cgtttacaaa tgtatttggc aaaaaaagag ccaatgtagt 181 gacaaccccc agcaccaatc ggaaaaataa gaagaataag acaaaagagt cccctcccac 241 agcgcattta attttacctg agccacatat atctttagca caacaaaaag cagataaaaa 301 taaaataaat ggagagccta gaggtggcgg cgcaggtgga aatagtgact cggataacat 361 agatagcaca gactgcaaca gtgagagcag cagtggtggg aagagccaag agttcagttt 421 ccctgtggat gtgaatcccg ccagtgacaa gaggtgctcc acagttgtca gttctcaaga 481 ggaaaaggca gttaccacca cttccaagac tcagacacgc cttgatggtg aagtaaattc 541 catgtcaaca agctacaaat ctttgccatt aagttctcca accatgaaac tgaatctcac 601 tagtcct //