LOCUS BG081509 621 bp mRNA linear EST 12-MAY-2010 DEFINITION H3066A07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3066A07 5', mRNA sequence. ACCESSION BG081509 VERSION BG081509.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 621) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081509.1. Other_ESTs: H3066A07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3066 row: A column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..621 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3066A07-5" /db_xref="taxon:10090" /clone="H3066A07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 175 a 117 c 119 g 210 t ORIGIN 1 aaataatagc ttagttttca tatctagaga acacagcata atttttgtga gttaaagtgt 61 tcataaatga ttggagagtt acaagaaaga tggctctggc tatgtaacac acagccgtgg 121 tcctctacta tttgtatgaa atgctctgtc accatcctac aatgttgcta acaaagggat 181 ccccttccag cgtggtgcca cttgcttctc tctgcagaga ggcagaagta acatgttcca 241 acaaaagacc tgtgactaaa gagggttgtg agggtagttt tcctttggca ctgtagttcc 301 gtttttctgt gagtctgcat ctgcatcact acaatcttct aattgtagtg agttagagat 361 taaggaacta gggagacaga aagccctgat cccaaaggat ccttttattt ggttcacaat 421 atttttggct ttttttacta aattttgcag aaattgctct atcctgacct aattttcttt 481 attgcagacc attcctatgg gcttaacctg agaattgtat tctaactaaa gagtgttgga 541 aggaatactt ccttctgacc tatgtatttt ccccattctt taatattctt gagtacttga 601 aaacacctta agagaaattt t //