LOCUS BG081235 657 bp mRNA linear EST 12-MAY-2010 DEFINITION H3062G11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3062G11 5', mRNA sequence. ACCESSION BG081235 VERSION BG081235.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 657) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081235.1. Other_ESTs: H3062G11-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3062 row: G column: 11 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..657 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3062G11-5" /db_xref="taxon:10090" /clone="H3062G11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 197 a 108 c 148 g 204 t ORIGIN 1 cattacacag ctttcagcaa aagatctgca agaaaagggc tttcatgttg tgataggtca 61 tgcttctgac ctggtggcat taaatacatc aaaagagcag ctaacaatga aggcgagaac 121 tccaccctgt agtccccagg agcctcatga gtgtgacact gagaacatgg agaatttgcc 181 ttgtggtaaa atccagcgga aagtgagaat gctattaggg caacagaaag caaatgctga 241 accgagtgct gaattggata aaaagagaac tgagtatctt cctgcacatg aagacagaac 301 ttgtgggtca ccagtacagt ctctattgga cctttttcag acaagcgagg agaaatcaga 361 atttttgggt tttacaggct acactgaaaa cagtggaata tgtgatgttt tagatatttg 421 ggaggaagaa aattcaagta ccctgttgtc aacgtttttt tcttcccctt caacttctgc 481 attcgttgga ttttagtatt aaatgtgctt ttcagaagtg acagctatat tcctgaagtt 541 tttataaata catatataat tagtggtggg ggtttgtttt gttttcgcca acttttttat 601 ggagccatct gtaaatatta attaaggtgg tgtttgtaat tttttacagg attgact //