LOCUS BG080894 597 bp mRNA linear EST 18-DEC-2003 DEFINITION H3058F12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3058F12 5', mRNA sequence. ACCESSION BG080894 VERSION BG080894.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 597) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT On Jan 26, 2001 this sequence version replaced BG080894.1. Other_ESTs: H3058F12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3058 row: F column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..597 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3058F12-5" /db_xref="taxon:10090" /clone="H3058F12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 155 a 125 c 156 g 161 t ORIGIN 1 ctccaggaga aaaactgatc tgatcggtgc tattactttt ggtgagagcg tttgggaagg 61 ctgtttgcat catgactgtc aatggaactg actgacttct ttgagctatg ttgttggcac 121 atgcatctgt gtgaacattt gtgaaaacat gaacttctgg ggtcactgga cttccaaagg 181 gggttacatt agaccgtggg atattagaca caggatagag ggtgcttcca ctaagattcc 241 gttggcgatg gacagcaggg ctcacactcc ggcacctgaa gttgctgccg gcagatgaat 301 tagttccctt attatcaaga ggagctggga ctgcaaaccc ttcttgcttg ttggtgttta 361 cagtggcacc ttgatgctgc acaggagaga cgggagtcaa acgaccaaaa tgagtgtcat 421 ggtgtctgga ctgagactga tatgactgtc caggtacagc aaaagcatga ggtttcctga 481 aacgatcttc tactagttcc tgatagcttg ggagaatgcc atgaccagaa accgatgaat 541 taccaacccc accataccca ttattcatcc attcaagctt ggttttatca gggtgag //