LOCUS BG080863 607 bp mRNA linear EST 12-MAY-2010 DEFINITION H3058C04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3058C04 5', mRNA sequence. ACCESSION BG080863 VERSION BG080863.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 607) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG080863.1. Other_ESTs: H3058C04-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3058 row: C column: 04 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..607 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3058C04-5" /db_xref="taxon:10090" /clone="H3058C04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 163 a 132 c 137 g 175 t ORIGIN 1 ccagctttta ttctttggca atcatggttt tgaatctgaa tgaccttgcc ttctataata 61 ccaaatgtta ttactaaccc gggttttaat acacttactg catgagattg ttttatagca 121 tggggttgtt gcagttagaa ctgtatcatg atcaatctaa atagaaaagc agaatttctt 181 tgaaaaccta aagtttgctg tattggttac tgtcaagcat tactttgtca cagttgtatg 241 gggctgtaag aagcagctga gtgaccttgt tgcagctgag agagaaagtg cagtgagcag 301 caggagtcag cagccggtgc tcaggcatca agaccgtaac aaccacactc gttctgtcct 361 tttggaagac cgcacggcct aaaactgaac gttaccctga aagcatgctt ctctccagat 421 atctctgtct ccttggagat atgaacatgg tagtatagag acacacatag acagacagcc 481 ttgggaatgt gtttcttcag ctcagtgctg attgaattgg tgccgggcct gacagactgt 541 tcattagcaa caccgttctt cactgagcag gtcactgtcg ctcaccacag gtgccaccca 601 tgatgac //