LOCUS BG080366 713 bp mRNA linear EST 12-MAY-2010
DEFINITION H3052G08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3052G08 5', mRNA sequence.
ACCESSION BG080366
VERSION BG080366.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 713)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG080366.1.
Other_ESTs: H3052G08-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3052 row: G column: 08
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..713
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3052G08-5"
/db_xref="taxon:10090"
/clone="H3052G08"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 185 a 116 c 150 g 262 t
ORIGIN
1 tgtttgatat cttttgtagt tttagaactc tgactgtctt tgtctgtgtg tgtgtctctg
61 tgtgtgtgtc tctgtgtgtg tgtgtgtctg tgtctgtgtg tgtctgtgtc tctgtcgtgt
121 ctctgtctct ctctctcttt tgtaaggaaa tggaagaaaa tttgctctaa atcaccagca
181 ttcaaacaaa tatttctgca ataaagttta caaagtctgg atttttttta tacctttcta
241 ttcatgtttt gtagaaatgt gacagggtac taatttttat actttttata aaaatattta
301 tattgtgctc aaatcaccag tttgtggata gaaaatttta cagccttctt ttccatgttt
361 tataacaaag ttttgtaata accctgctta agagtaagcc tggtagttag tcagaaagaa
421 gcaaaaataa caagtttgtt accagccttt tatagtcaat attttagatc agaactggtt
481 gaataaagaa ctcttaaagg ggaaaaataa actttgtagt tagcttcttt gtatcagttt
541 caggggaaat tctagcaatc gatcctatag cccacagaac taagattgtg gttaggtaaa
601 actaatcatg tgagtctcgt gtccctgtgg aaggtgtgcc cagtctgcct gggctgctgg
661 ccagctgagc aggggcaaat atggaatgtg gactcctggg ccatctgtct gct
//