LOCUS BG080314 712 bp mRNA linear EST 12-MAY-2010 DEFINITION H3052B09-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3052B09 5', mRNA sequence. ACCESSION BG080314 VERSION BG080314.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 712) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG080314.1. Other_ESTs: H3052B09-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3052 row: B column: 09 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..712 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3052B09-5" /db_xref="taxon:10090" /clone="H3052B09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 216 a 161 c 172 g 163 t ORIGIN 1 ggcaaacaca cagaagcctg tgcagatacc aagggatcag agctcactgt cccaggcccc 61 aggcagctgt ggaagatgga agggagcgac ggcagcccca ggatgtccac tgaacaggag 121 aacacagaga tgcatctcat tgaatgtatg ttaaagcact tcaagacaca gaaagtggcc 181 atttctaatg cgataagaag tacatttcct tttcttgaga gcctccgaga ccatgaattc 241 atcactggta aaatgtatga agatttgcta gattcctgta gatcgctggt ccctgtggac 301 aaagtgatct acagagccct ggaggaactg gagaagaaat ttgacatgac ggtactgtgc 361 gaattgttca atgaggtcaa catggagaag taccccgatt tgaatctcat tcgtagaagc 421 tttggatgtg tgtttcccaa tgaattgtgt ttccaaggaa ttgatggagg gaacccaaac 481 tcccagctaa gtcttgaaca aggacctggt gccagctatt ctcaaggaag cccgaatggg 541 tcatccttag atctctccgc atctgaaggc tggagaagta atgatagaag aaattccaac 601 ctcatgcagg caaaccaaac tgagaatcat cagcttgccg aatcaccagg tcaccttgat 661 tcctgtgaac tccaagtcca actgaataac agagatgcta ccccagagtc tt //