LOCUS BG080043 664 bp mRNA linear EST 12-MAY-2010 DEFINITION H3048D03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3048D03 5', mRNA sequence. ACCESSION BG080043 VERSION BG080043.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 664) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG080043.1. Other_ESTs: H3048D03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3048 row: D column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..664 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3048D03-5" /db_xref="taxon:10090" /clone="H3048D03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 186 a 156 c 163 g 159 t ORIGIN 1 ggccgttctc tccagcttgc cacccagtgg gggaaactct cacctggctc cactgatgga 61 tgccaggatc agtgcttaca ttgaagaaga agtccagaga cgccttcatg atttgcacag 121 ggcaattggt gatgccaacc atacacctgc tgatgtgatg aagagtaatg aggaacttca 181 caatggcacc actcaacgta agctaaagta tgagcggatg tattctcgct ctttgggaac 241 aaatcgagac gacctgaagg accccattaa gattagtatt cctcgctatg tcctgtgtgg 301 ccaagggaag gacgagcact tcgagtttga agtgaagatt tctgtcctag atgagacatg 361 gactgtattc aggcgctaca gtcgttttcg agaaatgcat aaaacattga agctaaagta 421 tgcagagctc gctgctcttg aattcccccc aaagaagctg tttggaaaca aagacgagcg 481 ggtagttgct gagcggcgga cacacttaga gaaatacctc agggagtttt tcagtgtgat 541 gctccagtcc gagacatctc cccttcacat caacaaagtg ggactgaccc tgtccaagca 601 caccatttgt gaattctcac cattcttcaa gaaaggagtt tttgactaca gcagccatgg 661 gaca //