LOCUS BG079832 580 bp mRNA linear EST 12-MAY-2010 DEFINITION H3045F06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3045F06 5', mRNA sequence. ACCESSION BG079832 VERSION BG079832.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 580) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079832.1. Other_ESTs: H3045F06-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3045 row: F column: 06 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..580 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3045F06-5" /db_xref="taxon:10090" /clone="H3045F06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 198 a 113 c 106 g 163 t ORIGIN 1 cgttgtctcc caaaaagagt tgaagaagga ctaagggaga aggtaacaca caaatccatt 61 aactgctcct caaaagctaa gtccaaaagg tgaggggggg tgttggttgg ttgttttgtt 121 tttgagattt ttttgagaca gagtttcaga tagctcaaga tgatcttgaa ctcacagctt 181 gaaaacccag tatttcagat cctcctgcct ctaactccca agtgctatga ttaccagcct 241 acattaccat gccctgggct aattaagtat ttatgaaggc ctttaatcta aaactaagca 301 gcataaaatc taacttgaag aggtaaatga tgaacaccat catctaagtt ttgagtagtg 361 aagttctaca tagcaattta aagactaaac cataaccaac agctagaggt tccagatcac 421 agactctaaa attcagaaaa tagactttac cttttggaac taaactgcat atcaaagttt 481 atcacacatg ccaaatgtcc ggaccatcaa tgtctaatga actgacttat taagtcagtc 541 aagttgtgct aagtgcagaa catttaaaag ttctacacat //