LOCUS BG079809 582 bp mRNA linear EST 12-MAY-2010 DEFINITION H3045C12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3045C12 5', mRNA sequence. ACCESSION BG079809 VERSION BG079809.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 582) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079809.1. Other_ESTs: H3045C12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3045 row: C column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..582 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3045C12-5" /db_xref="taxon:10090" /clone="H3045C12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 205 a 93 c 103 g 181 t ORIGIN 1 agctagacat ctgcctacat cctggaatcc tattacatgc agctaatgcg gattctaatc 61 tacttgagat aaagtgtaac ctggaaaagg gggggaaatg gtaaagctgg ttttatgtat 121 gattgttaca gagaaagaaa taaaatagaa ttctaaagat taacacaggg agagagaaat 181 ttttgagccc aagagtctaa agttttgtca tgaaaggtat aacctttttt catgcatata 241 cagtgaatat aaaagatttt ctaactgaag agccttttaa tgtcttactt gtctttcaaa 301 ttctgaagag cataagttgg ctttcattct taaagttgag gcagaattta atattaataa 361 tacttacaag actttggaaa ggtcaaataa ttgtaactta tatgaagtca tttcagctac 421 tttttgctcc atattccccc aggacattgg ttcccaccat gttaccccca accccatgtt 481 ttttaaagta atgaacagaa cccttcagaa aaaagtggac cgtactgtat ataatgcaca 541 tagaggcaat tgtgtatcaa tattaaaaat aaagtaaaac tt //