LOCUS BG079723 575 bp mRNA linear EST 12-MAY-2010 DEFINITION H3044D04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3044D04 5', mRNA sequence. ACCESSION BG079723 VERSION BG079723.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 575) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079723.1. Other_ESTs: H3044D04-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3044 row: D column: 04 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..575 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3044D04-5" /db_xref="taxon:10090" /clone="H3044D04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 158 a 113 c 155 g 149 t ORIGIN 1 ggagggacag agatgagtgg tgtggggcag acatcctcag tgcttctgca gagcaaatga 61 cctggcacac cattcaaagg ggccactggc aagacttgag gaaaactcat ctatccaagg 121 actcaacaag cagactccag agacatcccc aaagtgctgc ctggttcaag gaaccaggcc 181 tccagctgct gttgtgtttg tgggaagcag agagcctgaa gggatttggt ggtcatctgt 241 tccactttgt tttaatttgt tcctggaccc tgagcgggag gcccagatgc tatgatgctg 301 gtcatggaca acataggcaa ttgtatgatg atctgtttct taagtcacct atgaatgtgg 361 ttcatggatt aatgacatgc aaggattaaa gatggcactg gggtcccgag tggaataagg 421 aatatcatta gccattgata gatgagtttt gaagttacct gtggccatgc tcacagatat 481 ctgcagtttc aggcaattat actgtaactc ttggttttgc tgtatattgg aactgatatg 541 ggagagacaa tacctaagct acagaagggc aaaac //