LOCUS BG079648 607 bp mRNA linear EST 12-MAY-2010 DEFINITION H3043A03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3043A03 5', mRNA sequence. ACCESSION BG079648 VERSION BG079648.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 607) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079648.1. Other_ESTs: H3043A03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3043 row: A column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..607 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3043A03-5" /db_xref="taxon:10090" /clone="H3043A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 194 a 106 c 138 g 169 t ORIGIN 1 gcaaatacag tgaagtgttt gaagccatca acatcacaaa taatgaaaaa gttgttgtta 61 aaattctcaa gccagtaaaa aagaagaaaa ttaagcgtga aataaagatt ttggagaatt 121 tgagaggtgg gcccaacatc atcacacttg cagacattgt aaaagaccct gtgtcacgaa 181 cccctgcctt ggtttttgaa catgtaaaca acacagactt caagcaattg taccagacgt 241 taacagacta tgacattcga ttttacatgt atgaaattct gaaagccctg gattattgtc 301 acagcatggg gattatgcac agagatgtga aaccccataa tgtcatgatt gatcatgagc 361 acagaaagct tcggctaata gactggggtt tagctgagtt ttaccatcca ggccaagagt 421 ataatgtccg agttgcttct cgatatttca aaggtccaga gctacttgta gattatcaga 481 tgtacgatta tagtttggat atgtggagct tgggttgtat gctggccagt atgatcttcc 541 ggaaggagcc atttttccat ggacatgaca attatgatca gttggtgagg atagccaagg 601 ttctggg //