LOCUS BG079260 580 bp mRNA linear EST 12-MAY-2010 DEFINITION H3037G01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3037G01 5', mRNA sequence. ACCESSION BG079260 VERSION BG079260.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 580) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079260.1. Other_ESTs: H3037G01-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3037 row: G column: 01 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..580 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3037G01-5" /db_xref="taxon:10090" /clone="H3037G01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 114 a 119 c 163 g 184 t ORIGIN 1 tgtaagatca atgtgatctg ccctctggac cacaaactct gttgtgaaag gacagcatgc 61 tgcttttatg gagagggagt ttgagtgtgg gagcgttgtt ttcctgtatg tctggagtat 121 ctcatgccaa aattaggact tgccggaagg gaactcatat cccagggtgt aggcaggaag 181 attccatttc tctttgattt tttttttctc cttttttctt tggagacaga gcctcactaa 241 attgcccaga gtgggcttga aatctgttgc ccaggcaggc tttgaattta taacctgcct 301 ctgctctgag taactgccac ggcaggcctg aaccagcaga cctggccccc ttgaatttga 361 ataatgccgc tattcacttg taccctaaaa cgacgtgttt taacagagct tcagagaagt 421 ctgctcgctc cacaggggcc tggagcagta gttgggtcaa agacgccctg cattgtgtgt 481 gtgggtcatg tatggtcact atgcagcttt cctctgtgtg tgtgtgtgtg cgtgtgcgtg 541 tgcgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg //