LOCUS BG079193 637 bp mRNA linear EST 12-MAY-2010 DEFINITION H3036H10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3036H10 5', mRNA sequence. ACCESSION BG079193 VERSION BG079193.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 637) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079193.1. Other_ESTs: H3036H10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3036 row: H column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..637 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3036H10-5" /db_xref="taxon:10090" /clone="H3036H10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 214 a 106 c 120 g 197 t ORIGIN 1 aaggaaacca aaagagagca atagatttcc taacattgga gttgctgatg gttatgatgg 61 taagagtgct gggaaccgaa cttggtcctc tgcaagagca gctgagccat cgcttagacc 121 tatgaaagct gagatttaca gtatatgaac tagaatcctt tgaccagcct tagttaacct 181 gagtagggaa gtgagtgttc tgtttaattt attatcttga tttgctgaaa gggtttcttc 241 ttactattgt aatagtctct actagacatt aaaaataacc agatcttaaa ttttggctct 301 caagacatta tatagggaac accgagtatg aactgatttt tcttagattc tttttcttaa 361 accagacttc agaagaaaat ctaatagcat tttaacttca caatactgat caggttttat 421 ttccacaaaa gctcaaaagt aattgaccaa taataagctt aattactgaa agtatagata 481 tctatacaat atagcatatg agattgttcc cttgtagcaa atttttaaat atgtgtgtgt 541 gtgtacagta aaaagaattc agtctttaga aagcagaaac gttaagctca gcagtggtgg 601 cacacacacg cctttaaccc taacactaag gaggcag //