LOCUS BG079132 645 bp mRNA linear EST 12-MAY-2010
DEFINITION H3036B06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3036B06 5', mRNA sequence.
ACCESSION BG079132
VERSION BG079132.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 645)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG079132.1.
Other_ESTs: H3036B06-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3036 row: B column: 06
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..645
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3036B06-5"
/db_xref="taxon:10090"
/clone="H3036B06"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 185 a 132 c 150 g 178 t
ORIGIN
1 gctgttcgtt ggttgctgga attgtctaag aaaaatatct ttccttatca tgaagtcaga
61 gtaaaaagac atggaaaggt tgtggcagtc tcgtacgatg agtggaacag aaaaatacaa
121 aacaatttcg aaaagctgtt tcatgtttcc gaagaccctt cagatcctaa cgagaagcat
181 ccgaacctgg ttcacaaacg cggcatctac aaggacagct atggtgcgtc gagtccttgg
241 tgtgactatc agctcaggcc caacttcacc atagcaatgg tcgtggcccc tgaactcttt
301 actgctgaga aggcttggaa ggctttggaa attgcagaaa aaaaattgct tggtcccctt
361 ggcatgaaaa ctttagaccc agatgacatg gtttactgtg gagtttatga taatgcctta
421 gacaatgaca actacaacct tgctagaggc ttcaattacc accaaggacc tgagtggctg
481 tggccaattg ggtattttct tcgtgcaaag ttgtattttt ccaaaatgat gggtccagag
541 gctgctgcga agactgtatt tttggttaaa aatgttcttt ctagacatta tgttcatctt
601 gagagatccc catggaaagg ccttccggag ctcaccaatg agaac
//