LOCUS BG078905 662 bp mRNA linear EST 12-MAY-2010 DEFINITION H3033E12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3033E12 5', mRNA sequence. ACCESSION BG078905 VERSION BG078905.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 662) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG078905.1. Other_ESTs: H3033E12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3033 row: E column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..662 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3033E12-5" /db_xref="taxon:10090" /clone="H3033E12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 164 a 174 c 153 g 171 t ORIGIN 1 agcctgtaga atgcccaggc cttatgaggc tgtgaggtta tggctttggg gtaaagaata 61 aagacacctg ctccgagccc attaactctc gcccagtccc aggacagtcc ccaggccacc 121 agccagcgtc tcagaacaca aatcatagga aggttcctct tcctacccag agcaagtagc 181 atccgacgga ggacctaagc tgatcatgta gtgtcacatc cagacaacac aggtgccaca 241 agaaaacatc ttccagtctc ccaggagggg gaggggcacg ctcttcaccc gtatctgttt 301 gcctctattt attttacctg agatctcggt ttctaacccg ttagagccag catttcagtc 361 agtcttcaga tggccgctcc gcctctaatt ttgacaggat gggtttaaga tgcttccggc 421 cactaagtcc tgggtgatct tgtaaattag ctagaacatc tttttttcct gatactgtcc 481 catggcatcc taagttgtgt tagatgcatc tccgttctgc agttagtttt gtcttcactg 541 ttaccgtggc aacggaaggc tccagataaa cttgccatcc atcctgtgaa aggtgacatt 601 aaaggtcaca tgaaggacac agtggaagtg cccaagaagt actcccaggg ttccagtcta 661 gt //