LOCUS BG077811 633 bp mRNA linear EST 12-MAY-2010 DEFINITION H3020B07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3020B07 5', mRNA sequence. ACCESSION BG077811 VERSION BG077811.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 633) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077811.1. Other_ESTs: H3020B07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3020 row: B column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..633 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3020B07-5" /db_xref="taxon:10090" /clone="H3020B07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 208 a 97 c 158 g 170 t ORIGIN 1 atttgagatc attaatgcaa tctatgaacc tacagaagaa gaatgcgagt ggaaaccaga 61 tgaggaggat gaagtttcgg aggagctgaa agaaaaggcc aagattgaag atgagaaaaa 121 ggatgaagaa aaagaagacc cgaaaggaat tcctgaattt tggttgacag tgtttaagaa 181 tgttgacttg ctcagtgaca tggttcagga acatgatgaa cctattctga agcacttgaa 241 agatattaaa gtgaagtttt tcggatgctg gccagcctat gagttttgtc ttagaatttc 301 actttgaacc caatgactat ttcacaaatg aagtgttaac aaagacttac aggatgcggt 361 cagagccaga tgattctgac cccttttctt ttgacggacc agagattatg ggctgtacag 421 ggtgccagat agattggaaa aaaggaaaga atgttacttt gaaaaccatt aagaagaagc 481 agaaacacaa ggggcgtggg acagttcgta ctgtgactaa aacagtttcc aatgattctt 541 tctttaattt ttttgctcct cctgaagttc ctgagaatgg cgatctggat gatgatgctg 601 aggcgatact ggctgcagac tttgaaattg gtc //