LOCUS BG077688 642 bp mRNA linear EST 12-MAY-2010 DEFINITION H3018E08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3018E08 5', mRNA sequence. ACCESSION BG077688 VERSION BG077688.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 642) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077688.1. Other_ESTs: H3018E08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3018 row: E column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..642 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3018E08-5" /db_xref="taxon:10090" /clone="H3018E08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 208 a 117 c 157 g 160 t ORIGIN 1 agcaggatga gacgcagacc aagattaaac gagcttctca gaagaaacac gtgaacccag 61 tgaaggccct gagcgagttc aaagccatgg acagcatctg agcctgcaca gcccatgggg 121 ttctgaaaaa aaccagtcac atgcttcact caagtgtatt tgctaagtag agaacactgt 181 cttattccac agggaggtag cagatttcag actcaaccag gtggtgaatt ttgcaaggac 241 atgtttgtgt taaagctggt tagaaaaaaa aaagctttta gaattcaaaa atatatttct 301 agctatattt ttataagttt aatgaaaata acagttctgt aaccaaagag taccacatta 361 acttcttggt cacatttctg agtaggctga agtgcctgct ttctaggtag gggtgagcgc 421 ctgaggggag aggttgcttt ttagccctac tgttgggcag atggaattaa atgaccaagg 481 gtggcccagt gtaaatcaca gggcacctta gacggtctgg agaaggaagg taccagaaac 541 ctcttctgag gaataaacta taggagacaa taaaatataa cacagtaccc aggaagttga 601 ttgctttctt tatgaagcag aaggggaatt atgacgcatg gc //