LOCUS BG077399 692 bp mRNA linear EST 12-MAY-2010 DEFINITION H3014H12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3014H12 5', mRNA sequence. ACCESSION BG077399 VERSION BG077399.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 692) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077399.1. Other_ESTs: H3014H12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3014 row: H column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..692 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3014H12-5" /db_xref="taxon:10090" /clone="H3014H12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 166 a 189 c 208 g 129 t ORIGIN 1 gcttagctcg ctctcgaacc tccgtcttca gctcactgcc ttcgctccag acttcaccat 61 gtccatcagg gtgactcaga aatcctacaa gatgtccacc tccggtcccc gggccttcag 121 cagccgctcg ttcacgagtg gacccggtgc ccgcatcagc tcttccagct tttcccgggt 181 gggcagcagc agcagcagct tccggggaag catgggcacc ggcgtgggtc tgggcggctt 241 tggcggggct ggtgtcgggg gcatcacagc cgtcacggtg aaccagagcc tgttgagccc 301 cttgaagctg gaggtggacc ccaacatcca ggctgtgcgc actcaggaga aggagcagat 361 taaatccctg aacaacaagt tcgcctcctt cattgacaag gtgcgcttcc tggagcagca 421 gaacaagatg ctggagacca agtggagcct gttgcagcag cagaagacgt cgaggagcaa 481 catggacaac atgtttgaga gctacatcaa caacctccgc cggcagctgg aagccctggg 541 ccaggagaag ctgaagctgg aggctgagct tggcaacatg cagggcctgg tggaggactt 601 caagaataag tatgaggatg agatcaacaa gcgtacagag atggagaatg aatttgtcct 661 catcaagaag gatgtggacg aagcatacat ga //