LOCUS BG077243 604 bp mRNA linear EST 12-MAY-2010 DEFINITION H3013A03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3013A03 5', mRNA sequence. ACCESSION BG077243 VERSION BG077243.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 604) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077243.1. Other_ESTs: H3013A03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3013 row: A column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..604 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3013A03-5" /db_xref="taxon:10090" /clone="H3013A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 191 a 146 c 111 g 156 t ORIGIN 1 gtgttaccag ccttaacagc cctcacagtg ggctgcacac aattaatgga gaaggaatgg 61 aagaatctca gagccccatt aaaacagatc tgcttctagt tagccacaga cctagtcctc 121 agatcatacc atcaatgtct gtgtccatat atcccagctc agcagaagtt ctgaaagctt 181 gcaggaatct aggtaaaaac ggcctgtcta atagtagcat tctgttggat aaatgtccgc 241 ctccaagacc accatcctca ccataccctc ccttgccaaa ggacaagttg aatccaccta 301 cacctagtat ttatttggaa aataaacgtg atgctttctt tcctccatta catcaatttt 361 gtacaaaccc aaacaaccct gttacagtaa tacgtggcct tgctggagct cttaaattag 421 acttgggact tttctctact aaaactttgg tggaagctaa caatgaacat atggtagaag 481 tgaggacaca gttgttacaa ccagcagatg aaaattggga ccctactgga accaagaaaa 541 tctggcactg tgaaagtaat agatctcata ctacaattgc taaatatgct cagtaccagg 601 cctc //