LOCUS BG077109 609 bp mRNA linear EST 12-MAY-2010 DEFINITION H3010H01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3010H01 5', mRNA sequence. ACCESSION BG077109 VERSION BG077109.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 609) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077109.1. Other_ESTs: H3010H01-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3010 row: H column: 01 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..609 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3010H01-5" /db_xref="taxon:10090" /clone="H3010H01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 162 a 127 c 150 g 170 t ORIGIN 1 ttcttgttct tcttggggaa acatgcttga aaccaggaat cctgaaatcc tgagaacaca 61 actggggaaa cagaaatttg ctcagtttct ctccctgctc ttgcctcttg cctttgagac 121 aaggcagcag gaataggaaa gttcagcaat caaggtacta gattggatgt caggaccagg 181 tcctggtagg cttagggtcc agttttacca aagaaccagt tccttcaatg ttagaagcta 241 agctttatgt taccgtcatg gttgttggtg tttgaaggcg agtctcatct ctcctgttct 301 atttctccta caaatgcttt aggaggtagc agaaattgac actcaaagtg taagactgag 361 caggctgtgt gactcgtacc tgtaatctca gcccctaggg aggcagagtc agcaggctca 421 agttttatac cagcctgggc ttcatagtga atagcaggcc agtctgggct acatagcaag 481 ctcctgtgtc agcaagacaa aatgaagata aaaaaccgta aaatttaaga ttgtaggtct 541 gagggtgtgg ctcagtggta gcacgttttt tgtccagtgt gtatgtgaca ccctgaatgt 601 cattcccag //