LOCUS BG076712 573 bp mRNA linear EST 12-MAY-2010 DEFINITION H3004H08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3004H08 5', mRNA sequence. ACCESSION BG076712 VERSION BG076712.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 573) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076712.1. Other_ESTs: H3004H08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3004 row: H column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..573 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3004H08-5" /db_xref="taxon:10090" /clone="H3004H08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 160 a 136 c 136 g 141 t ORIGIN 1 gggagacacg atcatcaagt ccctgctggt tgaacctgaa ggtctagaga atgaagtgac 61 attcaacagt ttgctttgtc caacaggtgc tgaggtatcg gaacagatat ctctgaaact 121 gccatcagat gtggtagagg aatctgcccg agcttctgtc acagttttgg gagatatatt 181 gggttctgct atgcagaaca cacaggatct ccttaagatg ccctatggct gtggagaaca 241 gaacatggtt ctgtttgctc ctaatatcta tgtcctggac tatctgaatg aaacagagca 301 gctgacacag gagatcaaga ccaaggccat tacctatctc aatacgggtt accaaagaca 361 attaaactac aagcaccggg atggctccta cagtactttt ggggataaac ctggtaggag 421 tcatgccaat acctggctca cagcctttgt actgaagagt tttgctcagg ctcgaagata 481 tatcttcatc gatgaatcac acatcaccca agccctcacc tggctctccc agcagcagaa 541 ggacaatggc tgcttcagga gctccgggtc act //