LOCUS BG076594 547 bp mRNA linear EST 26-JAN-2001 DEFINITION H3003D05-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3003D05 5', mRNA sequence. ACCESSION BG076594 VERSION BG076594.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 547) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3003D05-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3003 row: D column: 05 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..547 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3003D05-5" /db_xref="taxon:10090" /clone="H3003D05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 126 a 137 c 140 g 144 t ORIGIN 1 gtccgggtct agatcgcgag cggccgccct tttttttttt tttttttttt ttttttttga 61 ctcaaaaaac ccaaccaaag ggccatttat tctaaagatg ctgctgacca aggagtgggc 121 ctagggaggg gctggcatgt aaagtaataa ataaaggggt ggcaaaaagc ctcagtcttt 181 accaatcttc ttaggcttca ttcttctcag ctctgaaggc atctgccttt tgggcgaatg 241 tctcagccac cagcaagggg aaaaccagag aagcatcagc atagaccttt actggctggg 301 cgtccatccg gatcttgccc caagagacag cctcatctgg ccgggctccg gagtctgagc 361 catcaaactc ctgggctggg ttgatataaa cagcgtagtc tgctccattc ctcatgaggt 421 tagcgttggc aatgtggtgc ttgaccacgc ctccacccag gatgatcatc ccagagcgct 481 tggcgaaaat ggcctgcgtg ttgatgagtc gcaggtcttc aacaatgtcc aggaccaagc 541 ctgggtt //