LOCUS BG076436 557 bp mRNA linear EST 12-MAY-2010 DEFINITION H3002E06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3002E06 5', mRNA sequence. ACCESSION BG076436 VERSION BG076436.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 557) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076436.1. Other_ESTs: H3002E06-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3002 row: E column: 06 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..557 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3002E06-5" /db_xref="taxon:10090" /clone="H3002E06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 171 a 139 c 128 g 119 t ORIGIN 1 cttatgtggg gaaaccactg atcgacattg agacagaagc tttaaaggat tcagaggaag 61 atgttgttga aacccccgct gtgtcccatg atgagcacac tcaccaagag ataaaaggcc 121 agaaaacact agcaacgcct gcagtgcgtc ggctggcaat ggaaaacaat attaagctga 181 gtgaagttgt tggctcagga aaagatggca gaatacttaa agaagatatt ctcagctttt 241 tggaaaagca gacaggagcc atactgcctc cctcaccaaa atctgaaatc acaccacctc 301 caccacagcc caaagacagg acctttccca cgccgatagc aaagcctcca gtgttcacag 361 gcaaagaccg aacagagcca gtgacaggct tccagaaggc aatggtgaag accatgtctg 421 cagccctgaa gattccccac ttcgggtatt gtgatgagat tgaccttact caactggtta 481 agcttcgaga agagctgaaa cctgttgctt tggcgcgtgg aatcaaactc tccttcatgc 541 ccttcttctt aaaggct //