LOCUS BG076411 596 bp mRNA linear EST 12-MAY-2010 DEFINITION H3159E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3159E09 3', mRNA sequence. ACCESSION BG076411 VERSION BG076411.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 596) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076411.1. Other_ESTs: H3159E09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3159 row: E column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..596 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3159E09-3" /db_xref="taxon:10090" /clone="H3159E09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 200 a 123 c 99 g 174 t ORIGIN 1 acagaaacat aaagcattta tttattattg ctataatcaa ggcaaacttt tctttaaaca 61 attagccttg ataatggtag tatatcagaa ccgttactca ctaagtttac agctgttctc 121 cactgctgag acatcactgc tttatacaca ccacctacaa gacctttgtc atacaagaag 181 agcttgagag tcacagtgca gtttcaacac ttgcctactt cctgtcttca caccaacctt 241 accctctcca aacttgttca tattatattt ttaaaaagtg gtagaagagg aggccaacta 301 catctagtta cttggaaaat caactgagat aaacggggta attgggagaa catgaaagaa 361 tttagtgtaa aaattacaga aggcatttta ccactaatat aaggagggat atagtcttgt 421 ctgtaggagc ctgcatgaca gcttccaaga gttttgaatc ctggagcagg gcaaagaata 481 ttgatggcca agtttccaac ccactctcta aggaagcatc tggcttgaca agccttcata 541 ttaacccaac tataacctaa aaacactgtc agttttattt aaccttaata tacatt //