LOCUS BG076347 643 bp mRNA linear EST 12-MAY-2010 DEFINITION H3158F07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3158F07 3', mRNA sequence. ACCESSION BG076347 VERSION BG076347.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 643) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076347.1. Other_ESTs: H3158F07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3158 row: F column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..643 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3158F07-3" /db_xref="taxon:10090" /clone="H3158F07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 166 a 135 c 182 g 160 t ORIGIN 1 cggaggaaac aggaatacag ataaatttat tagttaaata ctgattttac agccatttca 61 ccttaagaca atgttaacgg gttgtggagg aggggcaggc atggggaagg cggccttgag 121 ggagaaacag cgaaaatgat tacaacagaa tcttggttcg aagctattct ctgctacggc 181 cagtaaggtt taggggtggg gctgggaatt ttgggtaaaa taaagtaatg ccacagttgg 241 ctacagctct gtgggtgatg aggacaagga agaatctctg ggagccccag caatggtggg 301 agatgggagg gaggccaatc ctaggacagc tgctatcatg actgtcccgc cagccctggg 361 gacatcttct cccgtctatc acctttgtcc tttcacaaat ttcctttagt tgtttctgct 421 ttgaatttat tttgcaaaca gtctgtattt tctagacaaa ggatctgtgc tggagaaagt 481 cccagagcca ggtaactgtc tgacttaaga gggcttggct tggcgggctc ggggcaagca 541 agctagagtc ctgggaacag tattgtgctg tagacacaac ctccagaggg ccctccccca 601 ccccctgagg tgcagatgag ccatagtcac caaggctgct ttg //