LOCUS BG076305 763 bp mRNA linear EST 12-MAY-2010 DEFINITION H3158B06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3158B06 3', mRNA sequence. ACCESSION BG076305 VERSION BG076305.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 763) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076305.1. Other_ESTs: H3158B06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3158 row: B column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..763 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3158B06-3" /db_xref="taxon:10090" /clone="H3158B06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 303 a 133 c 92 g 235 t ORIGIN 1 aaacacatca gaattttatt gcttgaagaa tacaacatat gaaatcacaa gaacatcaaa 61 attaaaagtc actaggcttc aaacatataa tacatcatca gatgcagtaa aatattaatt 121 aacctgaagt ctgcatcaga aagaaaaagg tatggaaaat tacctaaatt gtttacttga 181 gaaacatata tttaaaacaa aataaaagaa tgttacagta caaattagaa aagccaaaag 241 tgactaactt atttctgtag actaaactac ctacctttgg tacttaacct ttttgaaaaa 301 atcaattcct tctatttttt ccaaatatgt catgggcata tccatgaaat accttgaaat 361 aacttcaaca taaaacattc agcaaaatta ctaccctttt tgttatatgg gggaagaata 421 tctgataaat gcataacaat atgcatataa atttcccttc taaaactcaa aaatatgaat 481 attaagaaat ctaatactta taaacatttc ttagctttca aaattcaaat cctagcagct 541 agaatctctt ctggggcttg gtgaatacag aaatttaaat ggcttggcaa ctgacatagg 601 aacttaatga cttatattat tatcttaggt ggcgtttttt tgtttccaaa atataagtaa 661 tatgccattt caccaaatac actggatccc tctcacaaac actaccacac tttatgcact 721 ggaaccaaat taaagctgct tccttttaac aagcaagtta aca //