LOCUS BG076254 815 bp mRNA linear EST 12-MAY-2010 DEFINITION H3157E01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3157E01 3', mRNA sequence. ACCESSION BG076254 VERSION BG076254.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 815) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076254.1. Other_ESTs: H3157E01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3157 row: E column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..815 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3157E01-3" /db_xref="taxon:10090" /clone="H3157E01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 245 a 189 c 157 g 224 t ORIGIN 1 gaaagagagc atattttatt tacatcacta tttccttttt ataatatgcc cgcagtctgc 61 atagtacaaa tttctaagaa attatgtagt tttaaattaa gatattttac aaagaaaatg 121 ttcaccatat gatctgtctc catttacatg aacttaaagg tcattctgaa tagcacttag 181 gaaattatgt aacgggactg aaaactctta atgcttcatt ctcacaaact tggtctagca 241 actaagctta taatcaggtc cccaggacgc acacaaatgc acgtgtgggt tgtagtttga 301 aactttctaa aggtaaatag agcacagctc ttaactgctc caatgaaccc ctctcccaga 361 ggtcagacct gtgtctgcac taagtacaca ggggacttac agggtgggtc acttgcaggc 421 acacccaggt gagttgcatc tcctctgtca gccacacttg ggtatctgtt tctattgatg 481 ctggacatca agacacattg cactaacagc aacgatgacc tcaccccttt cacatcacat 541 gacacagttc aaacttttat tagtgaacta gagaagatga tttcctcaat atttcaacca 601 tgagttcctc tgagcagctg gtattatgtc catgaaaaaa tagtcaagat taacttttca 661 tcatggtcaa agctacagcc acagcagacc tcccaggtag tctcttgact ccgctgtaag 721 aacaccaagc gcgggtcctg gacatcacgc agcagcgatg gaggtatcct ccaagaggcg 781 accctgcggc ttcacaaaaa tgctggtcgg gatga //