LOCUS BG076254 815 bp mRNA linear EST 12-MAY-2010
DEFINITION H3157E01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3157E01 3', mRNA sequence.
ACCESSION BG076254
VERSION BG076254.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 815)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG076254.1.
Other_ESTs: H3157E01-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3157 row: E column: 01
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..815
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3157E01-3"
/db_xref="taxon:10090"
/clone="H3157E01"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 245 a 189 c 157 g 224 t
ORIGIN
1 gaaagagagc atattttatt tacatcacta tttccttttt ataatatgcc cgcagtctgc
61 atagtacaaa tttctaagaa attatgtagt tttaaattaa gatattttac aaagaaaatg
121 ttcaccatat gatctgtctc catttacatg aacttaaagg tcattctgaa tagcacttag
181 gaaattatgt aacgggactg aaaactctta atgcttcatt ctcacaaact tggtctagca
241 actaagctta taatcaggtc cccaggacgc acacaaatgc acgtgtgggt tgtagtttga
301 aactttctaa aggtaaatag agcacagctc ttaactgctc caatgaaccc ctctcccaga
361 ggtcagacct gtgtctgcac taagtacaca ggggacttac agggtgggtc acttgcaggc
421 acacccaggt gagttgcatc tcctctgtca gccacacttg ggtatctgtt tctattgatg
481 ctggacatca agacacattg cactaacagc aacgatgacc tcaccccttt cacatcacat
541 gacacagttc aaacttttat tagtgaacta gagaagatga tttcctcaat atttcaacca
601 tgagttcctc tgagcagctg gtattatgtc catgaaaaaa tagtcaagat taacttttca
661 tcatggtcaa agctacagcc acagcagacc tcccaggtag tctcttgact ccgctgtaag
721 aacaccaagc gcgggtcctg gacatcacgc agcagcgatg gaggtatcct ccaagaggcg
781 accctgcggc ttcacaaaaa tgctggtcgg gatga
//