LOCUS BG076247 768 bp mRNA linear EST 12-MAY-2010 DEFINITION H3157D05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3157D05 3', mRNA sequence. ACCESSION BG076247 VERSION BG076247.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 768) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076247.1. Other_ESTs: H3157D05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3157 row: D column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..768 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3157D05-3" /db_xref="taxon:10090" /clone="H3157D05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 194 a 181 c 163 g 230 t ORIGIN 1 agaaacacta tttattttaa aacaaaacca aaacaacttt tagttagaaa acagatatat 61 taacaataaa atttcacatt gagttctctc ccacaattaa agctcacaga cagggcatag 121 agacagggga aagaattgag agtgaggtag gcaatgcttt gctttttgct tccaagtgtt 181 gcatgaagat gatgctctgg aaagccactg gcatagccct agtcttcctg catgccagag 241 gaaaactaac aatctcttaa aaggtaagat tgccagcttt cacagtactc tctagggagg 301 tttggttcca ccgataaata acattcctaa atctatacta agctcatcct ttggaacatc 361 aacctcatcc cctggttctt ctccaagctt cttccaccag ggtgcttgta tgtgcttcag 421 ggtggtaaga tgggcctgct tggccttggc tgccacaggc ctagatctac ttaggaattg 481 ctcgggttcc tttccttctg cctccttcag acttggtgcc ttcatcagct gttcaatatt 541 ggtgctgatc tgagccatca aagcttctct gtgttgctgg gctcgctctt ctatggctct 601 tcccataaaa tagtgctgaa gtcgttcttg tgcttgtgca tggagctctc tgctggccgc 661 ctctgacatc tgagagcacg ggtgtctttt gacataatcg tccacttgtt gcttcagttc 721 aactctgcgt gcatcagtga gttcttgaag tccatgccaa gaggcaaa //