LOCUS BG076161 635 bp mRNA linear EST 12-MAY-2010 DEFINITION H3156D01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3156D01 3', mRNA sequence. ACCESSION BG076161 VERSION BG076161.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 635) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076161.1. Other_ESTs: H3156D01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3156 row: D column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..635 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3156D01-3" /db_xref="taxon:10090" /clone="H3156D01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 184 a 145 c 156 g 150 t ORIGIN 1 ccaaatcctt catttaatat caggtaatgc ttcaactcac acacacagta ttcatatcat 61 agagaagagg gccccaaggg ccctgagtga gtcatgcatg atgcagtaaa taaagtcttg 121 gcccaaccca gagaaatcgg tcactgtctt agaaggagga taccacactc tttctcctca 181 tttttccttc ctagatggac ttagtccatg gaagaagaaa atttcaatca gtggaactga 241 ggaggccctg gagggtagat caggttgtag ttttataaaa tatgttttaa gaaaaaatag 301 gccaggcctc cctgcagcag cccagatgtt ggctggtcca gtggcctgga ctctgtagct 361 agaggggaag ggtgactgct gggcactggg gcaggtctag gatggagcag cagaagacct 421 tcctgtgaac atgaacataa atggccgctc ccccttagcc cagtggcgct gcagggaagc 481 tgctgagagc cacagctgtg cacgtgtcca gcgagaccaa ttatggagac taatgcagtg 541 agttaattaa gtcgttcatt gagggcttag ttttcagaga caagaaaaaa caaacttcac 601 cccttaagca gatacactcc actctaccca attat //