LOCUS BG076102 680 bp mRNA linear EST 12-MAY-2010 DEFINITION H3155F11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3155F11 3', mRNA sequence. ACCESSION BG076102 VERSION BG076102.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 680) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076102.1. Other_ESTs: H3155F11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3155 row: F column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..680 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3155F11-3" /db_xref="taxon:10090" /clone="H3155F11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 178 a 176 c 158 g 168 t ORIGIN 1 gcctagtcac tgtgatcatt accatgccac agtcacgcct ggcaagtcca agtgagcaga 61 gaagagaagc tcgcccatac gccagtgtat tccctctgga cctcagagga gagtggccac 121 tccagtctag atgatgggga cactcctcat ggtttgagct agaaccagtt agtgacccaa 181 aggaaaagga tagtctccaa gaagcacttt taaatttttt ctttttgttg tttgtttgga 241 aatgaagtct catgtgtctc aggctggcct tggtacttgc cctgtagcca aggataacct 301 ggaatttctg gttctatttc cagctcctaa atactggatg acaggctgtg cagccacatt 361 cagcttcttg gcattgcgag gctggaagcg gaggagaact caggaccttt cacttctctc 421 aagtccatgt tacactttgt gcccagccca gtccgagata ccttaaatga caacactgga 481 gtgtggctct tgactttcac atgcctgttc acacacaggc acacagcaca cgtttgtgca 541 aaacagctca cccgcatccc tgcacacgca catctgcaca caccggatgc atatacacaa 601 atactcgtca tggaagaaac acagactggg attcggattc tagatttgaa accagacaag 661 ggcgggcaac cctgggtagt //