LOCUS BG076043 712 bp mRNA linear EST 12-MAY-2010 DEFINITION H3154H10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3154H10 3', mRNA sequence. ACCESSION BG076043 VERSION BG076043.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 712) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076043.1. Other_ESTs: H3154H10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3154 row: H column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..712 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3154H10-3" /db_xref="taxon:10090" /clone="H3154H10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 147 a 193 c 145 g 227 t ORIGIN 1 gctgttctta aagattttat ttattttatg tatgtgagta cactgtagct gtcttcagac 61 ccattagaag agggcatcgg atcccattat agatggttat aagccaccat gtggtcgctg 121 agaattgaac tcaggacctc tggaagagca gtctgagcca tctctccagc cccaggtttg 181 gggttttata tatggaaaaa aaccagacca agacaagatg acttcccaca gggaagggat 241 ataaaattgt cccaccaact tcttcacacc actgagacta cttctttctc ttgtacctgg 301 acttagattt gaagttccct ctcctctggc ggggcagacc tgactgtttc ctctcttcaa 361 aggaagggcc agcccgatac tgtttcaggg ccttcttgct tgtgttggtg agttcttcat 421 caaacacaga cttctgctgc tgcttctgct ttttagcagg gcctgtaggc tcgtcctcag 481 gcattgcccg tgctcgcttg gttctgcgat tcctcttggc cagccgctct gcaaacatct 541 gtgccttgag gatttcaaac tgggacctct cctctgccgt catctccccc tttttcttgg 601 catccttcat aaacttcttc cttttcttct ttcctcttaa ggccaagtca aactcctgta 661 gagccttagc aatcttctcc ttcttcctct cttctttggt ctggaacagc tc //