LOCUS BG075318 543 bp mRNA linear EST 12-MAY-2010 DEFINITION H3145H02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3145H02 3', mRNA sequence. ACCESSION BG075318 VERSION BG075318.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 543) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075318.1. Other_ESTs: H3145H02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3145 row: H column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..543 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3145H02-3" /db_xref="taxon:10090" /clone="H3145H02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 177 a 91 c 100 g 175 t ORIGIN 1 cttttatatc ctttattttt aattggtatt ttagaacagc aaattgtctt tcacagcagt 61 gcctcctcgt ctgatgacat agcccccatt tctaaatgta aagatttaaa ataaatcaat 121 gaacattaag gcgtacaaac agctactact ttaagtctgt tcttacttaa taaggataac 181 ttttactcat attaaaatac atggaatgtt ggcacacaac tgaagctgct gtagaaagat 241 cagatgttct gtgggttact gaaactttct aaaaacatac cttacatggt ttttgtttta 301 caaatttcag tgttgagaaa tgtctaaata ataagtaaca attaaaataa aatgttttat 361 ttgtaaatta tgtacagaat acatcttatg ttatgacaag gagatgggga ggaaggaaga 421 gcctcgccgt ccagtcagcg ctcctcactt ctgctggaga tgaccgcctt tctctggatt 481 gaacgcacag gtcagttggg atttcctaag ctggaaaagg agaatctgta gctgaattaa 541 aag //