LOCUS BG075192 683 bp mRNA linear EST 12-MAY-2010 DEFINITION H3144D03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3144D03 3', mRNA sequence. ACCESSION BG075192 VERSION BG075192.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 683) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075192.1. Other_ESTs: H3144D03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3144 row: D column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..683 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3144D03-3" /db_xref="taxon:10090" /clone="H3144D03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 250 a 133 c 87 g 213 t ORIGIN 1 attataataa acatttattt ggtaagtcaa attattgacc caaaaatcaa aaactttact 61 tcagcaacag gaagtacagt ttcaatcaat ctccccctat cagacgccta ctccataact 121 gaagtccaaa tcccatgaat tacattacta aagggggtgg gggagacact agacttccac 181 aggaagactg ataaacttgg caatggttaa gtacataata acaaactcag aagtactacc 241 cagtcccaaa aactaactga aaaatttaaa tttataggaa ttttatacta agtaaaatcc 301 acaaaatttt catcaagtat gcaatactag ttacattata aaaactgata tattataaaa 361 gtaaagtgaa caatatggat ttcaaagcca acaggcaaat taccagaatg gatgtaaacc 421 aaagttttta aaagccattt agttctacat taaaataaac attcagcact ggaatcttca 481 gaattttcta gtattttgaa tatccctgtc ttccctttaa ttggtcttga agccttcatt 541 tgatcaatga gatcacttcg atccaacagt aattctagat cttcgtcact aatgaccttc 601 tctctggatc cttttacttc cctttcataa tctctggatt ttaataactc cattaattcc 661 tttgcatcta agaaattctt aga //