LOCUS BG075134 561 bp mRNA linear EST 12-MAY-2010 DEFINITION H3143F10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3143F10 3', mRNA sequence. ACCESSION BG075134 VERSION BG075134.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 561) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075134.1. Other_ESTs: H3143F10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3143 row: F column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..561 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3143F10-3" /db_xref="taxon:10090" /clone="H3143F10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 146 a 136 c 112 g 167 t ORIGIN 1 acatttaata tatttattgt ataaattatt ctcatcttta gtgccttctt tcagcttata 61 aatggcaaaa tagacaattg acagccataa agctaggcca ggtggaatct cctcctctct 121 aaggttagtc ctccacacag gacacacttg tctttgcgca tgccagctaa ggaactaagc 181 aatcatcctc ccctgatagt atgtcatctc caaagggact tctttctgtt ttccctattt 241 cctttgcttg ttagcaaatc aaaggatgtg catagttata aaattcgaag tgtaccaatt 301 acagaggtgg gtaaagggta ggttggtgag gttcaagtgc tggcaacttt tcttaaagca 361 aacacagaga gctcagcagc taaatcagct ctggacatct gctggggtga gaaggctgcc 421 caactctagg gcagagagcc catcagaggt tcatccctat acctggtact ttgagcaaac 481 ccaagccttc ctgcatactg tgatgtcttt tccgtcccac ccttcggccc ctctgtttcc 541 ttcatggctt cacacagttt g //