LOCUS BG075002 778 bp mRNA linear EST 12-MAY-2010 DEFINITION H3142A08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3142A08 3', mRNA sequence. ACCESSION BG075002 VERSION BG075002.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 778) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075002.1. Other_ESTs: H3142A08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3142 row: A column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..778 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3142A08-3" /db_xref="taxon:10090" /clone="H3142A08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 202 a 175 c 170 g 231 t ORIGIN 1 acacacaatg ctttattgac actaggacag ctgggagtca ctatgctttt aagttttttt 61 tttttttact tcattgagaa aatgttgaat taacattaat taattattaa gagacctgac 121 tttgatgtgc ttgctggtct gggctgagct ttaaatacac gcatgtgtta taactcgtcg 181 agaaaaggcg tatgtcccaa gtttccactc gctgccattg acttcttgcc agaaacaaac 241 ttttttgcag cctttacaac atcagcatca gccacggagt caatctgttg aaggacggta 301 gaaggtggca tataagaacc tgcagctaga gcctgtgacc caatttcact caggaagccc 361 tctgacgtct ccacagacat tagatatcca gcttttagct tgttcttggc agcttggaca 421 tctgcactgg aaaggtttcc ttgagcaact gctttgactt ggttgtaggc agcattgata 481 acctctccag cagctgcagc ctgggaaata gtgtaaattc caaagagccc agagtctgag 541 taactggcat taaatgcaga aacatcaaaa ggctggtgac ttcctttggc aacactctgg 601 ctcaggaggc tggtggtgtt gttgcccctt ttgatatgtg gtccagcacc aagaagatgc 661 tgaagtacac tgaatgcatt tgcctctgca tttccaatgg cagcactttc tgcaacaata 721 gcagcatgga ccaggttgtc tccattctgc tctctaattt cacctccacg gtatttgg //