LOCUS BG074883 632 bp mRNA linear EST 12-MAY-2010 DEFINITION H3140E07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3140E07 3', mRNA sequence. ACCESSION BG074883 VERSION BG074883.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 632) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074883.1. Other_ESTs: H3140E07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3140 row: E column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..632 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3140E07-3" /db_xref="taxon:10090" /clone="H3140E07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 210 a 122 c 126 g 174 t ORIGIN 1 agaaaggcaa aaagtataaa tttattatgt aacatgtgta tacaacagag aaatccattg 61 tgacatcact aattttaaag tataaaagat gataccacat ttacctaatt catgttttcc 121 tgtggtctta tagaatccta ttaccttttt gggtcctaga catctattac attgtcatat 181 atggatgtaa atcacatata acatataaga taaaatcaat tgttggagtt taaaaggaga 241 cagggcgtag cagaggaagg aagacgaatt agaactgtct tcaaaggtta atcagttatg 301 catctcattt agtggctgtc atagcagagc tgagttaagg tcattttcac aaaactgcac 361 aattactgtg ccctcccttt ccaaacagag caagcatgag caccgctgag acaagggaag 421 gtggcagttc cagggacacc aaacaaacgt ctggaattct gctcattccg tgtggatcta 481 caggtgacag acagcctgca aaaatcaaac tgtggaatag tacccacagg tcagactccc 541 ctgatttcag tgagcatcca tccattcagt acagcttctt ggatttacct tatgggagct 601 gcaaaacaga tgcttctaaa gagcttcatg ag //