LOCUS BG074563 521 bp mRNA linear EST 12-MAY-2010 DEFINITION H3136F06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3136F06 3', mRNA sequence. ACCESSION BG074563 VERSION BG074563.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 521) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074563.1. Other_ESTs: H3136F06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3136 row: F column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..521 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3136F06-3" /db_xref="taxon:10090" /clone="H3136F06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 126 a 112 c 112 g 171 t ORIGIN 1 gctttttaag atttatttat ttattatatg taagtacatt gtagctgtct ttagacacat 61 cagaaaaggg catcggatcc cattacagat agttgtgagc caccaggttg atgctgggat 121 ttgaactcag gacctccgga agagcagtca ctgctcttaa ccgctgagcc atctctccag 181 cccagaaatt tgtttttaaa tttttatttg ctagtgatta tcttttatac tttggttcga 241 atcaagctac caccagagaa atttgaaatt tattaactat tccattgttt catgagaagg 301 tgttgggtgc acaactctcc ctggactcag agttaagaac aggacatatt tccctcaccc 361 tttttcatgg ctgcttttgc cttaccaccc cttcttgcat gttaactaca tggactgcag 421 aggatcgagg tcgggttggt tctcagcatc cgcagggcgg catagaactg cctataagtc 481 cagctgtagg gtctctggtg cacttgttgg ctgtgtgtac t //