LOCUS BG074478 551 bp mRNA linear EST 26-JAN-2001 DEFINITION H3135F04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3135F04 3', mRNA sequence. ACCESSION BG074478 VERSION BG074478.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 551) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3135F04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3135 row: F column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..551 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3135F04-3" /db_xref="taxon:10090" /clone="H3135F04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 177 a 100 c 98 g 176 t ORIGIN 1 aacatcttaa catttattat aatttgtgta cattaatgtg gattaagcaa ggataattaa 61 aaacggaaag caattaaaaa gaagcaaatc aatgcaaaac catctctctt tgttagctgc 121 agaattttgt gtctaagaca caaaagggct gttttggatt caaatcaata ctagccttac 181 aagctgtctt tgagtatatt ttatatttct aaaactcctt aaatggcaga gtacaccttt 241 aagtggggaa gccatccgat ttagagcctt ttactcttgt ctatgaggcc tgcactgaaa 301 tgcctagata attaagggac tgacttagtt ttctcttact aattcatttg gcacacatat 361 gttattggcc actctctgct aagtcccatc ctagagctga acttgagaaa gaactagttc 421 ataattagta ttggggtgtg gcacaatgta ctccttcttc ccttcagagt tcaggtaaca 481 gataaatagt caaataaata gaatgttctt ctctggttac ctggtaggaa gaacaagccc 541 attcaaagtc t //