LOCUS BG074292 513 bp mRNA linear EST 12-MAY-2010 DEFINITION H3133C08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3133C08 3', mRNA sequence. ACCESSION BG074292 VERSION BG074292.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 513) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074292.1. Other_ESTs: H3133C08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3133 row: C column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..513 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3133C08-3" /db_xref="taxon:10090" /clone="H3133C08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 174 a 105 c 85 g 149 t ORIGIN 1 gagaaaatga gaattttaat tcttgaagta acagcaattt atccattgta tacactacta 61 tattaagcaa atcaaccttt tggaaaattt agacacagaa gggaactgtc tagttcagtt 121 ttcccttcag agagatgaaa agctttttgg ctcttaagtc tgtgataaaa ggcgtacata 181 attcttgtgt ctactgtaca gaatactgcc gctagctgga cttccaaact tgagtctcta 241 acactctgta atccagacag ggttcaaccc tccaccttgc acgcctgcgt tagaggactt 301 aaacacacaa tccaggaatt ccttacacta atttatacat tttaattggt tgcatatatt 361 aacatgtact ataagattct tttctaagaa gcattacata ataaatggat actgtaaaaa 421 gatctgatta gttaaaagta acaagcatta acagatacat acaaaacagc ctgctcagaa 481 cggagcctgg gcaccagcct tcccacagga cct //