LOCUS BG074099 672 bp mRNA linear EST 12-MAY-2010 DEFINITION H3130H02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3130H02 3', mRNA sequence. ACCESSION BG074099 VERSION BG074099.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 672) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074099.1. Other_ESTs: H3130H02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3130 row: H column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..672 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3130H02-3" /db_xref="taxon:10090" /clone="H3130H02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 203 a 152 c 129 g 188 t ORIGIN 1 cacacgtaat tagattttaa taagaactta aaaatcacag taccgccctt aaaatcaaag 61 actagttaaa attgaatgta gttctatcaa gaacaagaaa ttaactctgc gtgcatagta 121 tcacttaaag ttccatgaaa atataaaata tttcgatgaa tgtgactata tctgggacta 181 acatcattgg cttcaaaact tgacactaaa ggaatttcca atctacacac gctcagaggc 241 ttcacccagt aatcgctatt acaatcaccc agtaagctct attacatttc catccagaga 301 tcttgaatcc tcaggtgttc acgctgtgac cccctgttgt gacagtggta tggaacatct 361 ctgatgcaga tgaacgaaca ctgggatctt ttacagagct tcatctccat cacagagctg 421 ttctctagcc aaggacaggc ttctcactgc tgatccactg gcactctacg gcctccagct 481 tgggcagtat tgtaggagtc acaaagctta catttcatgc ctaagatatg gaactggact 541 gtggatcgtc cattacagtc attgcagaga atgtcaacag tcacgttctg gtattcggat 601 ggcatgggag tctgtgctac ctcagtatct agttgtctcc agtaccgagt catgtctaag 661 gcagaatgca ta //