LOCUS BG074085 689 bp mRNA linear EST 12-MAY-2010 DEFINITION H3130F10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3130F10 3', mRNA sequence. ACCESSION BG074085 VERSION BG074085.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 689) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074085.1. Other_ESTs: H3130F10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3130 row: F column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..689 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3130F10-3" /db_xref="taxon:10090" /clone="H3130F10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 238 a 125 c 110 g 216 t ORIGIN 1 aatttataag tgctttattg aaaaatacac atattttcat ataaaattac agtagcggta 61 ctaaggtttt ctaagtactc tgcacagcac tactctgtgg tggggggggg agtgccaggc 121 ttgtaggtcc tcagctgggt gctgtagagc agcatgaagt tacctagtaa cttggtttat 181 catgatccaa tttacaattg aattttttcc ttaggattat taatccaact taaaaaaacg 241 acaataatga ttaataaaga tatgcgtaga taatcaatag ctgttaaata attttctaat 301 ttgtataaat ggtactatgt actaataaaa acctcacttc tccaacctat ttttttaact 361 tccaggaata ccctcaaaga tagtttcttt gggataacta cttccaaaag gaaggggtca 421 aaacttttca aatactctca attcaacttg acttaaaaat ctttacttag ctaaaagatc 481 cctatgtaat gccactacca caaatggaag ttttttacat gtggccagaa catgtagcta 541 tatcagcagt cttttaagaa aagcattaaa agaaattatt agctgtttag cctaaggctt 601 gtacctacca aagttcacac catagaaagt gccatcataa atatacagca aaccctgggt 661 cacaatgcta tgcatcttac agccataaa //