LOCUS BG074075 684 bp mRNA linear EST 12-MAY-2010
DEFINITION H3130E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3130E09 3', mRNA sequence.
ACCESSION BG074075
VERSION BG074075.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 684)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG074075.1.
Other_ESTs: H3130E09-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3130 row: E column: 09
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..684
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3130E09-3"
/db_xref="taxon:10090"
/clone="H3130E09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 167 a 198 c 131 g 188 t
ORIGIN
1 gaaaaaataa aatttaccat ttatttcttt gatacacaga caactcagtg tgaccgatac
61 attcttagtc catccactac gtctttttgc cacattaact aacacaatgc tgtcaagctg
121 ggtcacgagt ccaactcagg gtcaagtttc tccactttga tgactacgtc cgggtctagg
181 gcagcagcgt cttggtgagc ctctgtctct gactctgaca acacttcctc cttgatcttc
241 acaggcttcc cgccagcctc ctcctcatcg tctgaagact cgtcaatctc ccactcatca
301 tcgatgtcca tttcaaacac cctcacatgc cggaggtttg aacttaacac acaggacact
361 tttcgaaggc cgttcccagc aacatactgc gctctcatgc tttctagcag cctccagtgt
421 ttctcaaagt gcatggtgcg tgtggggata atgctgccct gctcgtcaag ccttgtcgag
481 taactcccag tgaactcata ttcgtcagaa tcttcactgt tatacaccaa ggacagtgac
541 aactgaacca aaatcctgtc tctcccttca cgtcccatgg agtccttcag gatgaccgtg
601 acagtctcat catcatagaa ctgggcgtct agacaactgt aagagcttct tctgaccttg
661 tcagctgagg cagatgtgaa gctc
//