LOCUS BG073511 464 bp mRNA linear EST 26-JAN-2001
DEFINITION H3123E02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3123E02 3', mRNA sequence.
ACCESSION BG073511
VERSION BG073511.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 464)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3123E02-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3123 row: E column: 02
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..464
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3123E02-3"
/db_xref="taxon:10090"
/clone="H3123E02"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 181 a 120 c 129 g 34 t
ORIGIN
1 cccccccccc cccccaactt aaagggaaaa attaaaaaaa aaatttccaa attccaaggg
61 cccaaggggg ttttcccaac ggactttaaa aaacgggaaa aagcaaaaga aaacaagggg
121 gcaaagggaa aaagaaaaca aaaaaaaacc ccgggttccg gggaaaaggc aatccccgga
181 aaacccggaa aagccccaaa aaagggaaac ccggggaacg ggggggtaac ccgggggtta
241 aaattaagcc ctggaaaaaa gggggccaaa cccctggcca accccaacgg aagggccaaa
301 aagggcccgg gggaaaaacc gcccccgggg aagggcttgg gccaaaaccc cgggaaaagc
361 cctaaaaaaa atgggccttc aaggtaaccc ccaacccaaa gggaaaaccg gggggcccaa
421 ggcaaaagga acccggggga aataaaaggc cacggggggc aaaa
//