LOCUS BG073445 783 bp mRNA linear EST 12-MAY-2010 DEFINITION H3122F09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3122F09 3', mRNA sequence. ACCESSION BG073445 VERSION BG073445.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 783) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073445.1. Other_ESTs: H3122F09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3122 row: F column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..783 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3122F09-3" /db_xref="taxon:10090" /clone="H3122F09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 210 a 196 c 170 g 207 t ORIGIN 1 ggtttttcga gacagggttt ctctgtgcag ccctggctgt cctggaactc actctgtaga 61 ccaggctggc cttgaactta gaaatccacc ttcctctgcc tcctaagtgc tgggattaag 121 gcgtgcgcca ccaccgcccg gccattacca agcatcttaa actactaaat ctaggtatgg 181 tagcaactca ggcctgtaat cctaataatc ctgaggcaga cacaggactg ctacaactcc 241 aaggcagcgc atgctatgct gctgttatct caaaatgcat aaaaactgct tatagagatg 301 gagagataga tggctcagtg attaagagca ctaactgctc ttccagaggt cctgagttca 361 attcccagca accacatggt agagctctca accatctgta cagggatctg atgccctcag 421 tggtgtcagg aaatagctac agtatactca aattttttta aactacttat aattgaacct 481 ttaaaaattt ccaacaataa caacaaaaat ttcctgggaa agggttaggg cattaattaa 541 acctgggtta ggcagtgtca tggatttcta ggactgactg ttctatgaac ccaataccct 601 ctctcatttg caggatcccc aatcagcctt accttcttgt taatctctgt tcggtgatgg 661 tagcctttct gcccagctcg agccacagag aaggcaacac gggcagggtg ccaggctcca 721 atacaggcaa ctttgcgcaa acctcgatgg gtctttcggg gcagtttctt tgtatgccaa 781 cga //