LOCUS BG073418 859 bp mRNA linear EST 12-MAY-2010
DEFINITION H3122D04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3122D04 3', mRNA sequence.
ACCESSION BG073418
VERSION BG073418.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 859)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG073418.1.
Other_ESTs: H3122D04-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3122 row: D column: 04
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..859
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3122D04-3"
/db_xref="taxon:10090"
/clone="H3122D04"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 249 a 188 c 198 g 224 t
ORIGIN
1 ggttttttga gacagggttt ctctgtgtag ccctggctgt cctggaactt actctgtaga
61 ccaggctggc cttgaacgaa gaaatccacc tgcctctgct tcccaagcgc tgagattaaa
121 ggcgtgcgcc accactgccc ggcttggagt acaatcttac aattacatta gtctacaaag
181 gagatttaaa aaaagagtaa attatagaga gatgctgaag cataaataaa ccttgaagat
241 gttatgttaa gaagtcagtg gagccagaca gggcctggga ggagcctcag tggttaagag
301 gatgagctgc cttttgtttg atttttcgag acagggattc tctgtgcagt cctggccatc
361 ctggaacttg ctcttagacc aggctggcct cgaacctgcc tctgcctgag tgctgggatt
421 aaggtttgtc gccgccgcca ccgggcttga cttgctgctc ttgcagaacc ccgagggtct
481 gttctgagta cccacatgac agctcatcac cacatagacc cagttctgag gactctaaca
541 gtctagctcc cacagataca cacacgggca gacatacatg tgggccaaca ctcatacata
601 taaattatat aaatacatct tctaaaaaga acaaaaggaa atattgggat tccattcatg
661 aaacgttaaa ataaacaaac ctggaccaga aagtccatga gtgggtttgg aaagacagag
721 taactggtaa caggtctagt gttgtagctg cccattacga tggatatatc ctgtgtgtat
781 gccacaaact aataagtggt aaaattcaaa ttgataaatt acatagtgtc acacttagtc
841 tcattaaagc ttttagttg
//