LOCUS BG073357 665 bp mRNA linear EST 12-MAY-2010 DEFINITION H3121F09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3121F09 3', mRNA sequence. ACCESSION BG073357 VERSION BG073357.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 665) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073357.1. Other_ESTs: H3121F09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3121 row: F column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..665 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3121F09-3" /db_xref="taxon:10090" /clone="H3121F09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 230 a 120 c 114 g 201 t ORIGIN 1 ggtttttgag acaaggtttc tctgtgtagc cctggctgtc ctggaactca ctctgaagac 61 caggctggcc tcaaactcag aaatctacct gcctctgcct cccgagtgct gggattaaag 121 gcctgcgcca ccacacccgg ccgagactta ttttttactt gttaaatatg gcacataaaa 181 ctcaaatgct aattattaat tagtctttga ttaaatattg caatgaatac atttttggtg 241 aaaactcaac ttcctttaaa tgaaactttt gagagaagcc aagctaggct tgttagaact 301 catgagttgt tttgaatacc tctctagtaa tagatcttta gtaagtagta cattagccat 361 agatccagca gtaaagtcac atcaaggatt attccaatta agttcttcag aaaactcaat 421 gctaggtggc attttgtgag gttagtttat agacatggaa tagaacaaac cgtaaatagt 481 catatattca tttaatctta ttagactctt ttgtattaaa acagaatatg ggatggggta 541 ctgaatttgg tagggttcaa catatctata ttttacaaaa ataaagattc agaaaataat 601 gatgacatag atttaaagca caaatctcct ctaaaaaaca aacaaacaaa caaacaaaca 661 aaaac //