LOCUS BG073349 650 bp mRNA linear EST 12-MAY-2010 DEFINITION H3121F01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3121F01 3', mRNA sequence. ACCESSION BG073349 VERSION BG073349.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 650) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073349.1. Other_ESTs: H3121F01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3121 row: F column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..650 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3121F01-3" /db_xref="taxon:10090" /clone="H3121F01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 128 a 199 c 169 g 154 t ORIGIN 1 ctttctttct ttctttcttt ctttctttct ttcttttttt tttttttggc aataaataac 61 ttgaggaccc aaaaaccaaa ccaaaacaaa aaatacaacc agtatctttt ggggtaggtg 121 gtgggagact gtttaagtta ttggccttcc ctgggccacg caggtggtcc tgggcacaga 181 cggcatggtc accggcacgt gtgcatctcc acgagccgct ggcactgccg gcacttgacg 241 aagcagcacc agtggaacct gcagccacag cgctcggcca gctccacttg cgctgtgtgg 301 aagccgcggc cacagcacag tagctcgcag ccgtcaatgg ctttagatgt cttgttgcac 361 gtgcggcccc tcgtgcctag cagccactgc ggatgtcctg ctcacagaag tccgggctag 421 gctccaggta taccaggtcc tcatctgtat gtggcttgaa ctgtgcattc cgaggcacca 481 gcgcccggga ggagcctacg cgtcgtggct ccacctccgt ggcaccgtca aacttctcct 541 ttagcgcgtg gccaacctgg cggaagggcg gtacagcacg ccagcacgtc tttacctcgc 601 aggagcccga caccccgtga cacttgcact ccacccgcat gtgtgtcaag //