LOCUS BG073165 709 bp mRNA linear EST 12-MAY-2010 DEFINITION H3119E03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3119E03 3', mRNA sequence. ACCESSION BG073165 VERSION BG073165.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 709) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073165.1. Other_ESTs: H3119E03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3119 row: E column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..709 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3119E03-3" /db_xref="taxon:10090" /clone="H3119E03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 232 a 147 c 136 g 194 t ORIGIN 1 catttataaa tgtttattaa atgtcagtaa tttttacaaa gcaaatatta atagtagagg 61 gacaaacttt tgcaaaatat gtacaaaagt aaaaggcctt tatgcatatt aatttgtttg 121 gtgaaatgaa agcatacctt tggactctta gatctaccta caggaataat ttacggcgac 181 tcttgtacca aatctctgac caaaacccat cttttttgtc tacaactgta accagcttag 241 tttcaggaaa gttttagaaa gatgaatgga gaaacaaaca aacaaacaaa caaacaaaca 301 aaccctacca gacacaaata cttttattga gtgtagcata aaccatgtct cgttaggaac 361 accgtctata aggtctgcac tgtgtgctct actaaggctt cttgggcctt gtgagctcac 421 gtgtaagaga gagaagtcat tcaggatatt ttgcgaatct gctttcaagt aagaggtgaa 481 gagaaggtac acagtatatg cttcattacc ataggcaccc aacaagaaca cactgcctcc 541 tcccctgtca tccccggtgc cattgaagag gcacggttag tgtcaaaatc gtcactccct 601 ttggcaacgt tgcatctgtg aatggagcaa ggattgcata ccgagaaggt ggtttgtggc 661 catcagtgac cctcacagac ccaaaacttc tacctcgtag attcaggta //